After a flood: your septic system and well
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What to do with a flooded well and septic system: safe water first, then testing, disinfection, and getting the septic system back in service.
Floodwater is one of the biggest threats to a private well and a septic system at the same time. It can carry sewage, fuel, and farm runoff into the well. It can also saturate the drainfield so the septic system can't drain. Here's the order to deal with things once the water goes down.
1. Assume the well water is unsafe
If floodwater covered or came near the wellhead, don't drink the water or use it for cooking, brushing teeth, or making formula until it's been tested. Use bottled water. If you have to disinfect water, EPA's emergency guidance says to bring it to a rolling boil for at least one minute (three minutes above 5,000 feet). If boiling isn't possible, add unscented bleach, 8 drops of 6% bleach or 6 drops of 8.25% bleach per gallon, doubling it if the water is cloudy or very cold. Stir, and let it stand 30 minutes. Boiling and bleach don't remove fuel or chemical contamination.
2. Stay safe around the well
Floodwater can damage the electrical parts of the pump. Keep away from the well pump while flooded, and have an electrician or well contractor check the wiring and pump before switching it back on.
3. Disinfect and test the well
Once the water has gone down and the pump is safe, a flooded well usually needs to be pumped out and shock chlorinated. Penn State Extension notes that shock chlorination is designed for one-time contamination events, and a flood is one. See shock chlorinating a well. Your health department may offer free or low-cost testing after a declared disaster. Test for total coliform (and E. coli) and nitrate at a minimum, plus anything else the health department recommends for your area. Don't return to drinking the water until tests are clean.
4. Go easy on the septic system
While the ground is saturated, the drainfield can't absorb wastewater, and the system may back up. Use as little water as you can until the water table drops. Don't pump the tank while the ground is still flooded. An empty tank in saturated soil can shift or float out of the ground, and pumping won't help anyway because the drainfield is the bottleneck.
5. If sewage backed up into the house
EPA advises avoiding contact with sewage, because it may contain harmful pathogens, and contacting your local health department for guidance. People cleaning up should wear protective clothing such as long rubber gloves and face splash shields. After cleanup, wash all equipment, tools, and clothing, as well as the flooded area. EPA recommends disinfecting exposed items and areas with a mixture of 90% water and 10% household bleach, then letting the area dry thoroughly and leaving it unused until it has been completely dry for at least 24 hours.
6. Have the septic system checked
Once things are dry, have a septic professional inspect the system. Floods can leave silt and debris in the tank, damage pumps and alarms, and erode soil over the drainfield. Systems with electrical parts need them checked before they're powered up.
Before the next flood
Know where your well, tank, and drainfield are, keep the well cap sealed and above grade, keep a supply of bottled water, and store records somewhere safe. Our checklists cover the basics.
If the power is out too
A well pump needs power, and storms that flood often cause outages. The outage prep checklist and well pump generator sizing on our sister site Generator Watt Calculator cover running a pump on a generator safely.